{
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  "Package": "genesysr",
  "Version": "2.2.0",
  "Title": "Genesys PGR Client",
  "Description": "Access data on plant genetic resources from genebanks\naround the world published on Genesys\n(<https://www.genesys-pgr.org>). Your use of data is subject to\nterms and conditions available at\n<https://www.genesys-pgr.org/content/legal/terms>.",
  "License": "Apache License 2.0",
  "URL": "https://gitlab.croptrust.org/genesys-pgr/genesysr",
  "BugReports": "https://gitlab.croptrust.org/genesys-pgr/genesysr/-/issues",
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  "Repository": "https://mobreza.r-universe.dev",
  "Date/Publication": "2025-08-19 08:50:14 UTC",
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/genesysr"
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  "_cranurl": false,
  "_releases": [
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      "date": "2018-06-14"
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      "version": "0.9.2",
      "date": "2019-09-02"
    },
    {
      "version": "1.0.0",
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    "api2_url",
    "authorization",
    "check_country",
    "check_landorsea",
    "check_taxonomy",
    "client_login",
    "download_mcpd",
    "download_pdci",
    "filter_DOI",
    "filter_GENUS",
    "filter_INSTCODE",
    "filter_ORIGCTY",
    "filter_SAMPSTAT",
    "filter_SPECIES",
    "get_accessions",
    "list_crops",
    "list_institutes",
    "list_species",
    "mcpd_filter",
    "me",
    "print_setup",
    "SELECT_ALL_FIELDS",
    "SELECT_GEO_FIELDS",
    "SELECT_INFO_FIELDS",
    "setup",
    "setup_production",
    "setup_sandbox",
    "user_login"
  ],
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    {
      "page": "api2_url",
      "title": "Get partial API v2 URL for the provided path",
      "topics": [
        "api2_url"
      ]
    },
    {
      "page": "authorization",
      "title": "Provide OAuth2 token to use for authorization with Genesys",
      "topics": [
        "authorization"
      ]
    },
    {
      "page": "check_country",
      "title": "Run Land-or-Sea check on MCPD data. Uploads only rows where ORIGCTY, DECLATITUDE and DECLONGITUDE are provided.",
      "topics": [
        "check_country"
      ]
    },
    {
      "page": "check_landorsea",
      "title": "Run Land-or-Sea check on MCPD data using https://validator.genesys-pgr.org. Uploads only rows where DECLATITUDE and DECLONGITUDE are provided.  In practice it is better to use `check_country` if ORIGCTY data exists.",
      "topics": [
        "check_landorsea"
      ]
    },
    {
      "page": "check_taxonomy",
      "title": "Check MCPD taxonomic data (GENUS, SPECIES, SPAUTHOR, SUBTAXA, SUBTAUTHOR) using https://validator.genesys-pgr.org.",
      "topics": [
        "check_taxonomy"
      ]
    },
    {
      "page": "client_login",
      "title": "Login to Genesys as a service client (system-to-system)",
      "topics": [
        "client_login"
      ]
    },
    {
      "page": "download_mcpd",
      "title": "Download passport data for one genebank in Excel format and save it to disk",
      "topics": [
        "download_mcpd"
      ]
    },
    {
      "page": "download_pdci",
      "title": "Download PDCI data for one genebank in Excel format and save it to disk.",
      "topics": [
        "download_pdci"
      ]
    },
    {
      "page": "filter_DOI",
      "title": "Add filter on accession DOI",
      "topics": [
        "filter_DOI"
      ]
    },
    {
      "page": "filter_GENUS",
      "title": "Add filter by genus",
      "topics": [
        "filter_GENUS"
      ]
    },
    {
      "page": "filter_INSTCODE",
      "title": "Add filter by genus",
      "topics": [
        "filter_INSTCODE"
      ]
    },
    {
      "page": "filter_ORIGCTY",
      "title": "Add filter on Country of origin of material",
      "topics": [
        "filter_ORIGCTY"
      ]
    },
    {
      "page": "filter_SAMPSTAT",
      "title": "Add filter on Biological status of sample",
      "topics": [
        "filter_SAMPSTAT"
      ]
    },
    {
      "page": "filter_SPECIES",
      "title": "Add filter on specific epithet",
      "topics": [
        "filter_SPECIES"
      ]
    },
    {
      "page": "get_accessions",
      "title": "Get accession passport data as a data table.",
      "topics": [
        "get_accessions"
      ]
    },
    {
      "page": "list_crops",
      "title": "Fetch Genesys crops. Note that the list of Genesys crops does not fully correspond with various CROPNAME in MCPD provided by genebanks.",
      "topics": [
        "list_crops"
      ]
    },
    {
      "page": "list_institutes",
      "title": "List FAO WIEWS institutes.",
      "topics": [
        "list_institutes"
      ]
    },
    {
      "page": "list_species",
      "title": "Fetch taxonomic data of selected accessions.",
      "topics": [
        "list_species"
      ]
    },
    {
      "page": "mcpd_filter",
      "title": "Make or adjust filter using MCPD terminology",
      "topics": [
        "mcpd_filter"
      ]
    },
    {
      "page": "me",
      "title": "Who am i? Loads and prints the user profile from Genesys as JSON. You need to be logged in.",
      "topics": [
        "me"
      ]
    },
    {
      "page": "print_setup",
      "title": "Print Genesys client configuration",
      "topics": [
        "print_setup"
      ]
    },
    {
      "page": "SELECT_ALL_FIELDS",
      "title": "List of all supported passport data fields",
      "topics": [
        "SELECT_ALL_FIELDS"
      ]
    },
    {
      "page": "SELECT_GEO_FIELDS",
      "title": "List of passport data fields relevant for GIS analysis",
      "topics": [
        "SELECT_GEO_FIELDS"
      ]
    },
    {
      "page": "SELECT_INFO_FIELDS",
      "title": "List of basic passport data fields",
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      ]
    },
    {
      "page": "setup",
      "title": "Configure the Genesys environment",
      "topics": [
        "setup"
      ]
    },
    {
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      "title": "Setup for Genesys Production",
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      ]
    },
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      ]
    },
    {
      "page": "user_login",
      "title": "Login to Genesys as a user",
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      ]
    }
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